Abstract
A neuronal tree is a rooted tree with n leaves whose each internal node has at least two children; this class not only is defined based on the structure of dendrites in neurons, but also refers to phylogenetic trees or evolutionary trees. More precisely, neuronal trees are rooted-multistate phylogenetic trees whose size is defined as the number of leaves. In this paper, a new encoding over an alphabet of size 3 (minimal cardinality) is introduced for representing the neuronal trees with a given number of leaves. This encoding is used for generating neuronal trees with n leaves in A-order with constant average time and O(n) time complexity in the worst case. Also, new ranking and unranking algorithms are presented in time complexity of O(n) and O(n łog n), respectively.
Keywords
- Neuronal tree
- evolutionary tree
- phylogenetic tree
- tree of life
- cladistic rooted tree
- generation algorithm
- ranking and unranking algorithms
MSC
05C05, 05C85, 68R10
Cite this article
@article{cai-111257,
author = {Mahdi Amani and Abbas Nowzari-Dalini and Hayedeh Ahrabian},
title = {Generation of Neuronal Trees by a New Three Letters Encoding},
journal = {Computing and Informatics},
volume = {33},
number = {6},
pages = {1428--1450},
year = {2014},
issn = {1335-9150},
url = {https://cai.type.sk/content/2014/6/generation-of-neuronal-trees-by-a-new-three-letters-encoding/}
}
TY - JOUR AU - Mahdi Amani AU - Abbas Nowzari-Dalini AU - Hayedeh Ahrabian TI - Generation of Neuronal Trees by a New Three Letters Encoding JO - Computing and Informatics VL - 33 IS - 6 SP - 1428 EP - 1450 PY - 2014 SN - 1335-9150 UR - https://cai.type.sk/content/2014/6/generation-of-neuronal-trees-by-a-new-three-letters-encoding/ KW - Neuronal tree KW - evolutionary tree KW - phylogenetic tree KW - tree of life KW - cladistic rooted tree KW - generation algorithm KW - ranking and unranking algorithms ER -
Amani, M., Nowzari-Dalini, A., & Ahrabian, H. (2014). Generation of Neuronal Trees by a New Three Letters Encoding. Computing and Informatics, 33(6), 1428–1450. https://cai.type.sk/content/2014/6/generation-of-neuronal-trees-by-a-new-three-letters-encoding/